build.xml:86 build failed

[aiqubo]

“”“download-ivy:
[mkdir] Created dir: /root/.ant/lib
[get] Getting: http://repo2.maven.org/maven2/org/apache/ivy/ivy/2.1.0-rc2/ivy-2.1.0-rc2.jar
[get] To: /root/.ant/lib/ivy.jar
[get] Error getting http://repo2.maven.org/maven2/org/apache/ivy/ivy/2.1.0-rc2/ivy-2.1.0-rc2.jar to /root/.ant/lib/ivy.jar

BUILD FAILED
/home/aiqubo/MetaFunPrimer/MetaFunPrimer/RDPTools/PrimerDesign/build.xml:86: java.net.UnknownHostException: repo2.maven.org
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:184)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:607)
at java.net.Socket.connect(Socket.java:556)
at sun.net.NetworkClient.doConnect(NetworkClient.java:180)
at sun.net.www.http.HttpClient.openServer(HttpClient.java:463)
at sun.net.www.http.HttpClient.openServer(HttpClient.java:558)
at sun.net.www.http.HttpClient.(HttpClient.java:242)
at sun.net.www.http.HttpClient.New(HttpClient.java:339)
at sun.net.www.http.HttpClient.New(HttpClient.java:357)
at sun.net.www.protocol.http.HttpURLConnection.getNewHttpClient(HttpURLConnection.java:1226)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect0(HttpURLConnection.java:1162)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:1056)
at sun.net.www.protocol.http.HttpURLConnection.connect(HttpURLConnection.java:990)
at org.apache.tools.ant.taskdefs.Get$GetThread.openConnection(Get.java:712)
at org.apache.tools.ant.taskdefs.Get$GetThread.get(Get.java:626)
at org.apache.tools.ant.taskdefs.Get$GetThread.run(Get.java:616)
”“”
java version "1.7.0_251"

Can you help us with this?

[wangqion]

Hi there, Thank you for contacting us. It seems like the url of one of the third party jar files was changed recently. We are working on fixing the bug and push the update to github, hopefully in the next few days. We are sorry for the inconvenient and I will let you know when it's ready to use. Qiong

…

On Tue, Apr 7, 2020 at 6:54 AM aiqubo ***@***.***> wrote: “”“download-ivy: [mkdir] Created dir: /root/.ant/lib [get] Getting: http://repo2.maven.org/maven2/org/apache/ivy/ivy/2.1.0-rc2/ivy-2.1.0-rc2.jar [get] To: /root/.ant/lib/ivy.jar [get] Error getting http://repo2.maven.org/maven2/org/apache/ivy/ivy/2.1.0-rc2/ivy-2.1.0-rc2.jar to /root/.ant/lib/ivy.jar BUILD FAILED /home/aiqubo/MetaFunPrimer/MetaFunPrimer/RDPTools/PrimerDesign/build.xml:86: java.net.UnknownHostException: repo2.maven.org at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:184) at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392) at java.net.Socket.connect(Socket.java:607) at java.net.Socket.connect(Socket.java:556) at sun.net.NetworkClient.doConnect(NetworkClient.java:180) at sun.net.www.http.HttpClient.openServer(HttpClient.java:463) at sun.net.www.http.HttpClient.openServer(HttpClient.java:558) at sun.net.www.http.HttpClient.(HttpClient.java:242) at sun.net.www.http.HttpClient.New(HttpClient.java:339) at sun.net.www.http.HttpClient.New(HttpClient.java:357) at sun.net.www.protocol.http.HttpURLConnection.getNewHttpClient(HttpURLConnection.java:1226) at sun.net.www.protocol.http.HttpURLConnection.plainConnect0(HttpURLConnection.java:1162) at sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:1056) at sun.net.www.protocol.http.HttpURLConnection.connect(HttpURLConnection.java:990) at org.apache.tools.ant.taskdefs.Get$GetThread.openConnection(Get.java:712) at org.apache.tools.ant.taskdefs.Get$GetThread.get(Get.java:626) at org.apache.tools.ant.taskdefs.Get$GetThread.run(Get.java:616) ”“” Can you help us with this? — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#4>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAUFCZQJPEQVC57LVMQXOWDRLMIATANCNFSM4MDBRH6A> .

-- Qiong

[gunturus]

@aiqubo I made the changes to build script can you try compiling.

[aiqubo]

@aiqubo I made the changes to build script can you try compiling.

thanks,build successful now
but another error has occurred in centOS 7.5. Can you tell me how to fix it?

"""
[aiqubo@iZ8vbhjgwhc1nm2b1b1kwwZ PrimerDesign]$ make
gcc -shared -fPIC -o libPrimer3.so edu_msu_cme_rdp_primerdesign_utils_Primer3Wrapper.c thal.o oligotm.o -I/Library/Java/JavaVirtualMachines/jdk1.7.0_45.jdk/Contents/Home/include -I/Library/Java/JavaVirtualMachines/jdk1.7.0_45.jdk/Contents/Home/include/darwin -I. -lm
In file included from edu_msu_cme_rdp_primerdesign_utils_Primer3Wrapper.c:1:0:
edu_msu_cme_rdp_primerdesign_utils_Primer3Wrapper.h:2:17: fatal error: jni.h: No such file or directory
#include <jni.h>
^
compilation terminated.
make: *** [libPrimer3.so] Error 1
"""