- clusterProfiler supports exploring functional characteristics of both coding and non-coding genomics data for thousands of species with up-to-date gene annotation.
- It provides a universal interface for gene functional annotation from a variety of sources and thus can be applied in diverse scenarios.
- It provides a tidy interface to access, manipulate, and visualize enrichment results to help users achieve efficient data interpretation
- Datasets obtained from multiple treatments and time points can be analyzed and compared in a single run, easily revealing functional consensus and differences among distinct conditions
- It uses
enrichitas the underlying engine for ORA, GSEA, and topology-aware enrichment analysis, while providing a high-level and user-friendly interface for biological interpretation
For details, please visit:
- https://yulab-smu.top/contribution-knowledge-mining/
- https://yulab-smu.top/biomedical-knowledge-mining-book/
Guangchuang YU https://yulab-smu.top
School of Basic Medical Sciences, Southern Medical University
