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Feature request: WDL 1.3 Support

Status: Open.

#529 In dnanexus/dxCompiler;

· Ben-Habermeyer opened on Jan 15, 2026

How to use asset bundles in a WDL workflow?

Status: Open.

#525 In dnanexus/dxCompiler;

· e-dorigatti opened on Sep 18, 2025

dxCompiler fails to compile example scripts like bam_chrom_counter

Status: Open.

#524 In dnanexus/dxCompiler;

· tprodanov opened on Sep 15, 2025

CWL workflow expressionLib functions are overwritten by tool expressionLib when evaluating step valueFrom expressions

Status: Open.

#521 In dnanexus/dxCompiler;

· ThomasHickman opened on Jul 18, 2025

An object to be cloned is not in the closed state.

Status: Open.

#517 In dnanexus/dxCompiler;

· markwoon opened on Jun 14, 2025

dxCompiler -projectWideReuse flag does not pick up changes to Structs, causing RuntimeError

Status: Open.

#503 In dnanexus/dxCompiler;

· Ben-Habermeyer opened on May 12, 2025

Add option to specify root folder when searching for existing applets

Status: Open.

#493 In dnanexus/dxCompiler;

· jdidion opened on Feb 24, 2025

dxCompiler doesn't seem to work with recent versions of java

Status: Open.

#468 In dnanexus/dxCompiler;

· LiterallyUniqueLogin opened on Aug 6, 2024

Failed to generate Array[File] with optional input

Status: Open.

#466 In dnanexus/dxCompiler;

· nttg8100 opened on Jul 16, 2024

java.lang.IllegalArgumentException: Invalid HTTP host: 127.0.0.1:7890/

Status: Open.

#459 In dnanexus/dxCompiler;

· HackerLZH opened on Feb 19, 2024

CWL workflow complied to include a subworkflow with an outputs applet fails to run successfully

Status: Open.

#455 In dnanexus/dxCompiler;

· ThomasHickman opened on Sep 6, 2023

wdl 1.1 sep() vs command block ~{sep} return different values

tracked_internallyIssue is tracked internallyIssue is tracked internally

Status: Open.

#435 In dnanexus/dxCompiler;

· Ben-Habermeyer opened on Apr 10, 2023