Single Read Reconstruction for DNA Data Storage Using Transformers (official implementation)
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Dec 19, 2023 - Python
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dna-data-storage
Here are 10 public repositories matching this topic...
Python implementation of MGC+ channel coding for binary and DNA data storage, including encoding, decoding, simulations, and a DNA file storage codec.
bioinformatics information-theory coding-theory error-correcting-codes channel-coding dna-storage dna-data-storage
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May 16, 2026 - Python
Formal framework for DNA-based data storage, focusing on reliability engineering, error-bound modeling, and metabolic tradeoff analysis. Repository intended for posting the simulation results of the original project's source code.
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Apr 25, 2026
DNA Fountain Algorithm
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Feb 6, 2025 - Python
Associated repository for the "Is DNA the KEY to Solving the Data Storage Crisis?" 15 minute discourse podcast on YouTube!
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Feb 22, 2025
Multi-vendor physically-grounded synthetic DNA dataset generator for DNA data storage research. 7 synthesis profiles (Twist, IDT, DNA Script, Ansa, ETH Zurich, Evonetix), 3 sequencing backends (Illumina, Nanopore, PacBio), 3-layer error injection pipeline with empirical calibration.
python flask bioinformatics nanopore synthetic-biology dataset-generation error-correction trace-reconstruction noise-modeling dna-data-storage dna-synthesis twist-bioscience
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May 17, 2026 - Python
Biodegradable Digital Logic & Computational Matter. Simulates and models Biological Processing Units (BPUs) using DNA-based storage and organic protein logic circuits to eliminate global electronic waste (E-waste).
bioinformatics structural-biology synthetic-biology green-computing biocomputing hardware-simulation biological-computing dna-data-storage bio-processing-units-bpu e-waste-mitigation
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Jun 10, 2026
Official implementation of the N-Codon Protocol. A biomimetic digital storage architecture for AI models using DNA-inspired fractal compression and epigenetic weight modulation (.bioAI).
artificial-intelligence biomimetics fractal-algorithms green-computing hypernetworks data-topology neural-compression llm-optimization dna-data-storage bio-ai lichen-universe lichen-collectives
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Jan 18, 2026
A Python tool for encoding files into DNA sequences and decoding them back.
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Jun 27, 2025 - Python
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Dec 28, 2023 - JavaScript
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